（1） SCI論文（第一和通訊作者,用*標注）：
1) Jiang Yao, Zou Quan, Liu Bo, Li Shujuan, Wang Yi, Liu Tianlong, Ding Xiangdong*, Atlas of prenatal hair follicle morphogenesis using the pig as a model system, Front. Cell Dev. Biol. 2021,| doi: 10.3389/fcell.2021.721979.(IF: 6.684)
2) Shaolei Shi, Xiujin Li, Lingzhao Fang, Aoxing Liu, Guosheng Su, Yi Zhang, Basang Luobu, Xiangdong Ding*, Shengli Zhang*,Genomic prediction using Bayesian regression models with global-local prior. Frontiers in Genetics, 2021, 10.3389/fgene.2021.628205.(IF: 4.599)
3) Huatao Liu, Hailiang Song, Yao Jiang, Yifan Jiang, Fengxia Zhang, Yibing Liu,Yong Shi, Xiangdong Ding*, Chuduan Wang*, A Single-Step Genome Wide Association Study on Body Size Traits Using Imputation-Based Whole-Genome Sequence Data in Yorkshire Pigs. Frontiers in Genetics, 2021, 10.3389/fgene.2021. 629049.(IF: 4.599)
4) King Xing#, Huatao Liu#, Fengxia Zhang, Yibing Liu,Yong Shi, Xiangdong Ding*, Chuduan Wang*, Identification of key genes affecting porcine fat deposition based on co-expression network analysis of weighted genes. Journal of Animal Science and Biotechnology, 2021, 10.1186/s40104-021-00616-9.(IF: 5.922，中科院1區)
5) Ying Yu, Siqian Chen, Shuli Liu, Siyuan Mi, Wenlong Li, Shengli Zhang*, Xiangdong Ding*, Comparative analyses of sperm DNA methylomes among three commercial pig breeds reveal vital hypomethylated regions associated with spermatogenesis and embryonic development. Frontiers in Genetics,2021, DOI: 10.3389/fgene.2021.740036.(IF: 4.599)
6) Fu Lu, Jiang, Yao; Wang, Chonglong; Mei, Mengran; Zhou, Ziwen; Jiang, Yifan; Song, Hailiang; Ding Xiangdong*. A Genome-Wide Association Study on Feed Efficiency Related Traits in Landrace Pigs，Frontiers in Genetics, 2020, 11: 692.(IF: 3.517)
7) Wang Yi, Niu Zhigang, Zeng Zhengcheng; Jiang Yao; Jiang Yifan; Ding Yugong; Tang Sen; Shi Hongcai*; Ding Xiangdong*. Using High-Density SNP Array to Reveal Selection Signatures Related to Prolificacy in Chinese and Kazakhstan Sheep Breeds. Animals, 2020, 10(9): 1633.(IF: 2.323)
8) Song Hailiang; Zhang Qin; Ding Xiangdong*. The superiority of multi-trait models with genotype-by-environment interactions in a limited number of environments for genomic prediction in pigs. Journal of Animal Science and Biotechnology, 2020, 11(1): 88.(IF: 4.392,中科院1區)
9) Song, Hailiang; Zhang, Qin; Misztal, Ignacy; Ding, Xiangdong*.Genomic prediction of growth traits for pigs in the presence of genotype by environment interactions using single-step genomic reaction norm model. Journal of Animal Breeding and Genetics, 2020, 137(6): 523-534.(IF：1.822)
10) Jiang Y, Tang S, Xiao W, Yun P, Ding X*. A genome-wide association study of reproduction traits in four pig populations with different genetic backgrounds. Asian-Australas J Anim Sci. 2020 Sep;33(9):1400-1410.
11) Yao Jiang, Yifan Jiang, Haihan Zhang, Mengran Mei,Hailiang Song，Xianghui Ma, Li Jiang, Zhenquan Yu, Qin Zhang, Xiangdong Ding*,A Mutation in MAP2 is Associated with Prenatal Hair Follicle Density, FASEB J,2019, 33(12):1-12.(IF：5.391)
12) Hailiang Song, Shaopan Ye, Yifan Jiang, Zhe Zhang, Qin Zhang and Xiangdong Ding*, Using imputation-based whole genome sequence data to improve the accuracy of genomic prediction for admixed population in pig， Genetics Selection Evolution, 2019,51(1):58. (IF:4.017, 中科院1區)
13) Jiang Y, Jiang Y, Wang S, Zhang Q, Ding X*. Optimal sequencing depth design for whole genome re-sequencing in pigs. BMC Bioinformatics. 2019 Nov 8;20(1):556.(IF:3.242)
14) JinXin. Zhang, Hailiang. Song, Qin. Zhang, Xiangdong Ding*Assessment of relationships between animals based on pedigree and genomic information, Animal, 2019, 11: 1-9.(IF：2.4)
15) Suoyu Zhang, Jinxin Zhang, Qin Zhang, Hongjie Yang, Zhigang Wang, Xiangdong Ding*, and Yuchun Pan*. Estimation of genetic parameters for reproductive traits in connectedness groups of Duroc, Landrace and Yorkshire pigs in China. Journal of Animal Breeding and Genetics. 2019, 9.(IF:1.822)
16) Hailiang Song, Jinxin Zhang, Qin Zhang, Xiangdong Ding*. Using different single-step strategies to improve the efficiency of genomic prediction on body measurement traits in pig. Frontiers in Genetics, (2019).9: 730-730.(IF: 3.517)
17) Hongying Ma, Sheng Wang#, Guorong Zeng, Jintu Guo, Minghao Guo…,Xiangdong Ding*,Chuanjiang Zhao*. The Origin of a Coastal Indigenous Horse Breed in China Revealed by Genome-Wide SNP Data. Genes, 2019, 10(3):241-267.(IF: 3.759)
18) Peipei Ma, Ju Huang, Weijia Gong, Xiujin Li, Hongding Gao, Qin Zhang, Xiangdong Ding* and Chonglong Wang. The impact of genomic relatedness between populations on the genomic estimated breeding values. Journal of Animal Science and Biotechnology,2018 9:64.(IF: 4.392，中科院1區）
19) *Dong-Dong Wu, Xiang-Dong Ding#, Sheng Wang,Jan M Wójcik, Yi Zhang, Ma?gorzata Tokarska, Yan Li, Ming-Shan Wang, Omar Faruque , Rasmus Nielsen*, Qin Zhang*, Ya-Ping Zhang*. Pervasive introgression facilitated domestication and adaptation in the Bos species complex[J]. Nature Ecology & Evolution, 2018, 2(7): 1139.(共1， IF：12.541，中科院1區)
20) Yao Jiang, Shaoqing Tang, Chuduan. Wang, Yuan Wang, Yongxiao Qin, Yuliang Wang, Jinxin. Zhang, Hailiang Song, Shirong Mi, Fan Yu, Wei Xiao, Qin Zhang, Xiangdong Ding*. A genome-wide association study of growth and fatness traits in two pig populations with different genetic backgrounds[J]. Journal of Animal Science, 2018, 96(3):806-816.(IF: 2.155）
21) Song hailiang, li leyi, Ma peipei, zhang shengli, Su guosheng, Mogens Lund, Zhang Qin, Ding Xiangdong*. Improving the accuracy of genomic prediction of body conformation traits in Chinese Holsteins using markers derived from high-density marker panels[J]. Journal of Dairy Science, 2018, 101(6):5250.(IF: 3.432，中科院1區)
22) H Song, L Li, Q Zhang, S Zhang, X Ding*. Accuracy and bias of genomic prediction with different de-regression methods[J]. Animal, 2018, 12(6):1111-1117.(IF：2.4)
23) Y Wang, X Ding#, Z Tan, K Xing, T Yang, Y Wang, D Sun, C Wang. Genome-wide association study for reproductive traits in a Large White pig population[J]. Animal Genetics, 2018, 49(2):127-131.(IF：2.841)
24) H Song, J Zhang, Y Jiang, H Gao, S Tang, S Mi, F Yu, Q Meng, W Xiao, Q Zhang, X Ding*. Genomic prediction for growth and reproduction traits in pig using an admixed reference population[J]. Journal of Animal Science, 2017, 95(8):3415-3424.(IF: 2.155）
25) Song H, Li L, Zhang Q, Zhang S, Ding X. Accuracy and bias of genomic prediction with different de-regression methods. Animal. 2018 Jun;12(6):1111-1117.(IF：2.4)
26) Yuan Wang, Xiangdong Ding#, Zhen Tan, Chao Ning, Kai Xing, Ting Yang, Yongjie Pan, Dongxiao Sun, Chuduan Wang. Genome-Wide Association Study of Piglet Uniformity and Farrowing Interval[J]. Frontiers in Genetics, 2017, 8:194:1-9.(IF: 3.517)
27) ChonglongWang, QinZhang, LiJiang, RongQian, XiangdongDing*, YaofengZhao*. Comparative study of estimation methods for genomic breeding value, Chinese Science Bulletin, 2016, 61(5):353-356.(IF:9.511,中科院1區）
28) Ma Yunlong, Ding Xiangdong#, Qanbari S, S Weigend, Zhang Qin* and H Simianer. Properties of different selection signature statistics and a new strategy for combining them. Heredity (2015) 115, 426–436.(IF:3.436)
29) He Sang,Wang Sheng,Fu WeiXuan, Ding Xiangdong*,Zhang Qin, Imputation of missing genotypes from low-to high-density SNP panel in different population designs, Animal Genetics, 2015, 46(1):1-7(IF：2.841)
30) Zhe Zhang, Xiujin Li, Jiaqi Li, Xiangdong Ding*, Qin Zhang, GPOPSIM: a simulation tool for whole-genome genetic data, BMC genetics, 2015,16(10)1-6.(IF: 2.567)
（2） 中文：
1) 邱奧，王雪，孟慶利，張勤，丁向東，三款豬50KSNP芯片基因型填充效果研究，中國畜牧雜志，2021，33-38.
2) 周子文，王雪，丁向東*. 基于高密度SNP標記估計群體間遺傳關聯. 遺傳，2021，DOI: 10.16288/j.yczz.20-351.
3) 丁向東, 邱小田, 王志剛, 等. 我國生豬遺傳改良計劃對生豬種業影響和未來工作建議[J]. 中國畜牧雜志, 2020,56(6):169-174.
4) 周子文,付璐，丁向東*等，利用后裔測定驗證大白豬基因組選擇實施效果研究，畜牧獸醫學報 2020 , 51 ( 10 ): 2367 - 2377.
5) 張金鑫，唐韶青,宋海亮,高虹,蔣堯,江一凡,彌世榮,孟慶利,于凡,肖煒,云鵬,張勤, 丁向東*, 北京地區大白豬基因組聯合育種研究,中國農業科學，2019,52（12）：2161-2170
6) 汪楷庭, 丁向東* 豬PLA2G4A基因單核苷酸多態性及其與飼料報酬性狀的關聯分析 2019,55（11）：52-58
7) 高虹 邱小田王長存，張金鑫，，張鎖宇，王源，張勤王志剛，楊紅杰，丁向東*，我國杜洛克、長白、大白豬區域性聯合遺傳評估研究，畜牧獸醫學報，2018,49（12）：2567-2575.
8) 張金鑫，張鎖宇，邱小田，王長存，王源，高虹，王志剛，楊紅杰，張勤，丁向東*. 我國杜洛克、長白和大白豬場間遺傳聯系分析，畜牧獸醫學報，2017.
9) 張越 楊宇澤 張金鑫 張鎖宇 邱小田 唐韶青 丁向東*,DMU、GBS和Herdsman3個軟件育種值估計的比較，中國畜牧雜志，2017 , 53 (7) :29-35.
10) 秦永孝；王玉梁；高雪峰；彌世榮；邱小田；張勤；丁向東*,基于紅外設備的母豬發情狀態下體溫變化研究。畜牧獸醫學報, 2016,52（1）:85-91.
（3） 軟件著作權：
1) 全基因組基因與環境互作模擬軟件V1.0，2021SRBJ0035
2) 基于系譜信息的群體關聯估計軟件，2021SRBJ0422,2021
3) 基于系譜信息的群體關聯估計軟件，2020SRBJ0422,2020
4) 基于隨機抽樣方法的群體關聯估計軟件，2020SRBJ0502,2020
5) 基于基因組信息的群體關聯估計軟件 2020SRBJ0423,2020
6) 綜合系譜和基因組信息的群體關聯估計軟件 2020SRBJ0424,2020
7) 基于一步策略快速估計基因組育種值軟件（簡稱fastBLUP） V1.0, 2019SRBJ0851，2019
8) 豬基因組選擇育種網絡平臺系統V2.0，2019SRBJ0853，2019
9) 基因一步法自動化豬基因組遺傳評估軟件V2.0,2018SRBJ1087，2018
10) 全國和區域性豬育種值估計計算軟件V1.0, 2018SRBJ1085，2018
11) 不同品種豬場場間關聯率計算軟件V1.0,2018SRBJ1086,2018
12) 豬基因組選擇育種網絡平臺，2017SRBJ0040，2017
13) 動物體溫監測系統，2017SRBJ0106，2017
14) 基于GBLUP方法自動化豬基因組遺傳評估軟件，2017SRBJ0105，2017
15) 基于自動化需求的豬基因組遺傳評估軟件，2017SRBJ0168，2017
16) 基于BayesR方法自動化豬基因組遺傳評估軟件，2017SRBJ0250，2017
17) 基于一步法自動化豬基因組遺傳評估軟件，2017SRBJ0167，2017
18) 基于自動化需求的全基因組選擇數據準備軟件V1.0，2015SRBJ0030，2015
19) 基因組SNP芯片數據編輯軟件V1.0，2015SRBJ0210，2015
20) 基于F統計量基因選擇信號檢測軟件V1.0, 2015SRBJ0213，2015
21) 兩性狀全基因組數據模擬軟件V1.0,2014SRBJ0036，2014
22) 基于一步法策略的基因組育種值估計軟件V1.0, 2014SRBJ0037,2014
23) 基于基因組和微效多基因信息的混合模型估計基因組育種值軟件V1.0，2014SRBJ0038,2014
24) 利用系譜傳遞不平衡精細定位基因軟件，2011SRBJ4833，2011
25) 基因組育種值最佳線性無偏預測軟件V1.0，2010SRBJ5208，2010
26) 全基因組群體數據模擬程序軟件，2010SRBJ3976，2010
27) 基因組育種值估計程序軟件， 2010SRBJ3977， 2010
28) 半同胞資料單倍型推斷軟件，2010SRBJ5207， 2010